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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs60882115 chr6:26909096 C/G RNF5P1 chr8:38458179-38458718:- 0.66 6.12 2.0E-9 Box Plot
THCA rs60882115 chr6:26909096 C/G ZFP57 chr6:29640169-29648887:- 0.77 7.53 2.55E-13 Box Plot
THCA rs60902764 chr8:11784991 A/T SGK223 chr8:8175258-8244008:- 0.36 6.61 1.04E-10 Box Plot
THCA rs609054 chr11:49219725 C/G FOLH1B chr11:89372395-89431886:+ 0.37 6.43 3.16E-10 Box Plot
THCA rs609151 chr11:77560072 A/G INTS4L1 chr7:64601603-64694600:+ 0.43 7.72 6.94E-14 Box Plot
THCA rs60921132 chr8:10964969 T/A SGK223 chr8:8175258-8244008:- 0.44 8.09 4.8E-15 Box Plot
THCA rs60927663 chr2:101198710 C/A LOC285359 chr3:101431278-101432259:+ 0.37 7.19 2.55E-12 Box Plot
THCA rs609280 chr11:49240187 C/T FOLH1B chr11:89372395-89431886:+ 0.38 6.63 9.35E-11 Box Plot
THCA rs60933972 chr5:46050796 CT/C LOC647121 chr1:121260910-121313686:+ 0.38 8.06 6.07E-15 Box Plot
THCA rs60965269 chr10:51829520 T/C FAM21B chr10:47894023-47949412:+ 0.58 7.54 2.33E-13 Box Plot
THCA rs61034923 chr7:140177483 CCTT/C LOC441455 chr9:99488103-99489749:+ 0.47 6.08 2.52E-9 Box Plot
THCA rs61055172 chr8:11788548 G/T SGK223 chr8:8175258-8244008:- -0.45 -8.43 3.96E-16 Box Plot
THCA rs61072354 chr2:132196635 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.55 1.49E-10 Box Plot
THCA rs61104316 chr2:132241135 C/T TUBA3E chr2:130949316-130956034:- 0.54 6.23 1.0E-9 Box Plot
THCA rs61128712 chr6:28047087 CAGAT/C BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot